PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN17676.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 542aa    MW: 61169.6 Da    PI: 5.8912
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN17676.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.89.2e-14351397354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 + h + ErrRR+++N+ f+ Lr+llP+      +K +Ka+iL+ A+e ++sL
  KHN17676.1 351 QQHTISERRRREKLNENFQALRTLLPPG-----TKKNKATILTTATETMRSL 397
                 579***********************97.....8*************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.449348397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-15351414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-11351397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-17352412IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-11353402No hitNo description
SMARTSM003538.9E-12354403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MHSMDGVFAL PEAARADCLR SLVQSCGCTY VSLWQYDSNL SNLFFLDGFY DATNNQQSSS  60
LGSVAERLLH QYRALTFDVN DHEYVPGVVF RNQLPYIELQ LLDLLRLTST EIQTKFFQEA  120
GIEIAVFMGC KNGEIELGFS NISQVDIQTT LKNLFPQDFY IHSQSTTDQN PPLSSSSSSS  180
SFMSLSTGRP DQCSSSLLLS SIPGTSQYHF PQTLPTQTQT QTQTSPQYQA LDLVPVIPSY  240
FPTPEGEHEA IVKAFISVMS SSSTSTSQQH QPHQIVPKYT SVVHPGATAF NKCRPDTLNP  300
NITPQLGSNF RSQSLQKRSF EFFRNLNNLT RMRERVTQPA PRPISTQHQY QQHTISERRR  360
REKLNENFQA LRTLLPPGTK KNKATILTTA TETMRSLMDE IEKLNMRNQQ LMTVLSVKEA  420
TATSTEENKA KPSSSYERLN VGVSHVSESS SSEEQMVNLQ VTVRGESCLV DLLIQLLEFL  480
ERVQNVNFVS MDANNHITGE TAINQLTFRL RIIEGIEWDE HAFEEAVRRV AADTIQWQPL  540
EQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1356361ERRRRE
2357362RRRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006600454.10.0PREDICTED: putative transcription factor bHLH041
TrEMBLA0A0B2Q7P40.0A0A0B2Q7P4_GLYSO; Putative transcription factor bHLH041
TrEMBLK7MK280.0K7MK28_SOYBN; Uncharacterized protein
STRINGGLYMA17G06190.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.13e-43bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]